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Comparison of Fluorescence Microscopy and Solid-Phase Cytometry Methods for Counting Bacteria in Water

机译:荧光显微镜和固相细胞计数法对水中细菌计数的比较

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摘要

Total direct counts of bacterial abundance are central in assessing the biomass and bacteriological quality of water in ecological and industrial applications. Several factors have been identified that contribute to the variability in bacterial abundance counts when using fluorescent microscopy, the most significant of which is retaining an adequate number of cells per filter to ensure an acceptable level of statistical confidence in the resulting data. Previous studies that have assessed the components of total-direct-count methods that contribute to this variance have attempted to maintain a bacterial cell abundance value per filter of approximately 106 cells filter−1. In this study we have established the lower limit for the number of bacterial cells per filter at which the statistical reliability of the abundance estimate is no longer acceptable. Our results indicate that when the numbers of bacterial cells per filter were progressively reduced below 105, the microscopic methods increasingly overestimated the true bacterial abundance (range, 15.0 to 99.3%). The solid-phase cytometer only slightly overestimated the true bacterial abundances and was more consistent over the same range of bacterial abundances per filter (range, 8.9 to 12.5%). The solid-phase cytometer method for conducting total direct counts of bacteria was less biased and performed significantly better than any of the microscope methods. It was also found that microscopic count data from counting 5 fields on three separate filters were statistically equivalent to data from counting 20 fields on a single filter.
机译:细菌丰度的直接总数是评估生态和工业应用中水的生物量和细菌学质量的关键。在使用荧光显微镜检查时,已经确定了多种因素可导致细菌丰度计数的变化,其中最重要的是每个过滤器保留足够数量的细胞,以确保对所得数据的统计置信度处于可接受的水平。以前的评估影响这种差异的总直接计数方法的组成部分的先前研究试图将每个过滤器的细菌细胞丰度值维持在约106个过滤器-1。在这项研究中,我们确定了每个过滤器细菌细胞数量的下限,在该下限处,丰度估计值的统计可靠性不再被接受。我们的结果表明,当每个过滤器的细菌细胞数量逐渐减少到105以下时,微观方法越来越高估了真实细菌的丰度(范围为15.0%至99.3%)。固相流式细胞仪仅稍微高估了真实细菌的丰度,并且在每个过滤器的相同细菌丰度范围内(8.9至12.5%)更加一致。用于进行细菌总直接计数的固相细胞仪方法比任何显微镜方法的偏见都少,并且执行效果也明显好于其他显微镜方法。还发现,在三个单独的过滤器上计数5个场的显微计数数据在统计上等同于在单个过滤器上计数20个场的数据。

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